PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027356823.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 541aa    MW: 61018.9 Da    PI: 4.3169
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027356823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS374.91e-1141715371374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lv+ Ll+cAeav  +d+++a+ lL+r+  lasp+gd++qR+  +f+ +L++rl+     +   + ++ + +  + +++l a++l+++++P++ f+
  XP_027356823.1 171 LVHMLLACAEAVGCRDNQQAELLLSRIWALASPSGDSLQRVSYCFATGLKSRLSLlP--QNTLTTSAIDVPLITRDNKLEAFQLLYQTTPYIAFG 263
                     689**************************************************9832..22222333333333489999**************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak.rl.e 187
                     +++aN+aI++a +g++ +Hi+D+++++ lQWp+L++aLasRp+gpp+lRiTg+   e  ++ +l++  + L + A++lg+p+ef+++ ++ ++ +
  XP_027356823.1 264 FMAANEAIYQASQGKSSIHIVDLGMEHTLQWPSLIRALASRPDGPPKLRITGLTGDE--DNLKLQASMNVLVEEASSLGIPLEFHII-SDpAIsS 355
                     ******************************************************955..9**************************6.5545515 PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                      l++e+L++++gEal Vn++lqlh+ ++es    +   e+L+ +k+lsP+v++vveq+++hn++ Fl rfle+l+yysa+fdslea++pr+s++r
  XP_027356823.1 356 LLTMEKLSLREGEALFVNSILQLHKYVKESRGYLK---EILQSIKKLSPTVLTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSQQR 447
                     67*************************88877777...9******************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      k+Er  ++ ei+n+va eg +r+erhe++ +Wr++l++aGF+ +pl    ++qa+++l+ ++ dgy++ +e+g l+lgWk+rp++++SaW+
  XP_027356823.1 448 LKIERLHFADEIRNIVAFEGPDRVERHERVDQWRRQLGRAGFQVMPLM--CTSQARMMLSVYDCDGYTLSSEKGNLLLGWKERPVMMASAWQ 537
                     ***********************************************7..679**************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MEDISRWLSF YVNESVNHDF AIRRYCPARM EQEQGGECQG KEALVLDDTE LCSSDATSTP  60
WLASSEVDDF VDSFINMDQY EYEDQGSQER HQSFDHFVVN DEDEADAYST VNDIFGYVPI  120
TMEDEELEMY ECVTTVMEEE EVEMNGSFGA IPELVPCPQE PSLGMDQGLD LVHMLLACAE  180
AVGCRDNQQA ELLLSRIWAL ASPSGDSLQR VSYCFATGLK SRLSLLPQNT LTTSAIDVPL  240
ITRDNKLEAF QLLYQTTPYI AFGFMAANEA IYQASQGKSS IHIVDLGMEH TLQWPSLIRA  300
LASRPDGPPK LRITGLTGDE DNLKLQASMN VLVEEASSLG IPLEFHIISD PAISSLLTME  360
KLSLREGEAL FVNSILQLHK YVKESRGYLK EILQSIKKLS PTVLTVVEQD TNHNGPFFLG  420
RFLESLHYYS AIFDSLEASM PRNSQQRLKI ERLHFADEIR NIVAFEGPDR VERHERVDQW  480
RRQLGRAGFQ VMPLMCTSQA RMMLSVYDCD GYTLSSEKGN LLLGWKERPV MMASAWQVAS  540
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.16e-82GRAS family protein