PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027356408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 223aa MW: 24703.3 Da PI: 8.8548 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.2 | 9e-19 | 34 | 79 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + XP_027356408.1 34 KGPWSAEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 79 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 58.4 | 1.6e-18 | 88 | 130 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++++Ede ++ a++q+G++ W+tIar ++ gRt++ +k++w++ XP_027356408.1 88 PFSAQEDETIIAAHAQYGNR-WATIARLLP-GRTDNAVKNHWNST 130 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MEAMNRSSSS TASSSDSSSS DSNQRNPNKP DRIKGPWSAE EDRILTRLVE RYGPRNWSLI 60 SRYIKGRSGK SCRLRWCNQL SPTVEHRPFS AQEDETIIAA HAQYGNRWAT IARLLPGRTD 120 NAVKNHWNST LKRRPKGGSL IVNPNDGGAS SSTPCPLEDD PLTALTLAPP GVRNGGVVEE 180 AVADHRPSPE NVPTGFWDMM RDVIAREVRE YVSSNFSDNS GFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 2e-60 | MYB family protein |