PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027356100.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 271aa MW: 29746.5 Da PI: 9.5458

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027356100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.6e-18	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v +G+++W++I++ ++ gR++k+c++rw + XP_027356100.1 12 KGAWSPEEDEALQRLVDTYGPRNWTLISKSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	60.5	3.5e-19	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T+eEd+ +v+a++++G++ W+tIar ++ gRt++++k++w++ XP_027356100.1 66 TFTPEEDQTIVKAHARFGNK-WATIARLLP-GRTDNSIKNHWNST 108 69****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MGSAKKELDR IKGAWSPEED EALQRLVDTY GPRNWTLISK SIPGRSGKSC RLRWCNQLSP 60 QVQHRTFTPE EDQTIVKAHA RFGNKWATIA RLLPGRTDNS IKNHWNSTLK RKCPAIAQHP 120 PPKRSATVSG QPVTPSSPSG SDFSDSTLPP ISPTPIQVYK PLAETASSVT DPLTSLSLSL 180 PGSDSSDGSD PNQNQVSSCS ANPVKEIKSG PSEQLGSGKH VFSEELLNGM QEMIRMEVRN 240 YMSGLERNGL CLQTQSIRNS VIKRMGIDRV E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-66	MYB family protein