PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027355601.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRAS

Protein Properties

Length: 465aa MW: 51664.2 Da PI: 5.7155

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027355601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	313.3	5.2e-96	133	451	2	328
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++L +cA+ s ++ ++a + L+rls+ s++g+p+qRla+yf +AL+ar+++ ++ p+ + s+++ ++ + ++k++++++P+ kfshl XP_027355601.1 133 LKALSDCARL-SLSHPHQAAESLSRLSNSISQHGNPTQRLAFYFSQALSARISS----PKHKPPSPTPSPTSPEDFTLSYKTLNDACPYSKFSHL 222 57899995.55566677788***************************9....22233333344456889999************* PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 taNqaIlea+eg++++Hi+Df+i qG+QWp+Llqa+a+R++g+p s+Ri ++ + + g + +l++t++rL++fA+ l+++f+f++ v + +++ XP_027355601.1 223 TANQAILEATEGSSHIHIVDFGIVQGIQWPPLLQAFATRSSGKPlSIRISAIPAIALGtsPAPSLSATANRLSDFAKLLHLNFQFTP-VLTPIHQ 316 ************************************99888*****88889899*********************.799 PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 l+ ++++++p+EalaVn++lql++lld++ + + + L+l ksl+Pk+v++ e ea++++ Fl+rf al+y+salf+sle +lp++s +r XP_027355601.1 317 LNHSSFSIQPNEALAVNFMLQLYNLLDDTPTAVE---TALRLAKSLNPKIVTLGEYEASLTRVGFLTRFNTALSYFSALFESLEPNLPSDSPDRF 408 **********************99999988...9***************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvp 328 vE llgr+i+ vv er+e +e+Wr +e++GF++v+ XP_027355601.1 409 QVESLLLGRRITAVVGPDSPG--ERMEDKEQWRVLMESCGFQSVE 451 **************999..*****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MAYMCADSGN LMAIAQQVIK QKQQQEQEQK QQQQQQQQQQ QQQQQHPLSL LQPWPPTDFT 60 DPFQVPDPGF HFPPLDPHSA AFRFSDFDSD EWMDTLIDTP PDFSLYPFPF QPTPPPSPSP 120 PNQNDAVSSP PLLKALSDCA RLSLSHPHQA AESLSRLSNS ISQHGNPTQR LAFYFSQALS 180 ARISSPKHKP PSPTPSPTSP EDFTLSYKTL NDACPYSKFS HLTANQAILE ATEGSSHIHI 240 VDFGIVQGIQ WPPLLQAFAT RSSGKPLSIR ISAIPAIALG TSPAPSLSAT ANRLSDFAKL 300 LHLNFQFTPV LTPIHQLNHS SFSIQPNEAL AVNFMLQLYN LLDDTPTAVE TALRLAKSLN 360 PKIVTLGEYE ASLTRVGFLT RFNTALSYFS ALFESLEPNL PSDSPDRFQV ESLLLGRRIT 420 AVVGPDSPGE RMEDKEQWRV LMESCGFQSV EDLTRQKVIK GIEWN

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MAYMCADSGN LMAIAQQVIK QKQQQEQEQK QQQQQQQQQQ QQQQQHPLSL LQPWPPTDFT  60
DPFQVPDPGF HFPPLDPHSA AFRFSDFDSD EWMDTLIDTP PDFSLYPFPF QPTPPPSPSP  120
PNQNDAVSSP PLLKALSDCA RLSLSHPHQA AESLSRLSNS ISQHGNPTQR LAFYFSQALS  180
ARISSPKHKP PSPTPSPTSP EDFTLSYKTL NDACPYSKFS HLTANQAILE ATEGSSHIHI  240
VDFGIVQGIQ WPPLLQAFAT RSSGKPLSIR ISAIPAIALG TSPAPSLSAT ANRLSDFAKL  300
LHLNFQFTPV LTPIHQLNHS SFSIQPNEAL AVNFMLQLYN LLDDTPTAVE TALRLAKSLN  360
PKIVTLGEYE ASLTRVGFLT RFNTALSYFS ALFESLEPNL PSDSPDRFQV ESLLLGRRIT  420
AVVGPDSPGE RMEDKEQWRV LMESCGFQSV EDLTRQKVIK GIEWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66770.1	1e-145	GRAS family protein