PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027355600.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 499aa    MW: 55403.5 Da    PI: 6.1063
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027355600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3597.1e-1101334992374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L +cA+  s ++ ++a + L+rls+  s++g+p+qRla+yf +AL+ar+++      ++ p+ + s+++ ++ + ++k++++++P+ kfshl
  XP_027355600.1 133 LKALSDCARL-SLSHPHQAAESLSRLSNSISQHGNPTQRLAFYFSQALSARISS----PKHKPPSPTPSPTSPEDFTLSYKTLNDACPYSKFSHL 222
                     578999**95.55566677788*******************************9....22233333344456889999***************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+eg++++Hi+Df+i qG+QWp+Llqa+a+R++g+p s+Ri ++ + + g   + +l++t++rL++fA+ l+++f+f++ v + +++
  XP_027355600.1 223 TANQAILEATEGSSHIHIVDFGIVQGIQWPPLLQAFATRSSGKPlSIRISAIPAIALGtsPAPSLSATANRLSDFAKLLHLNFQFTP-VLTPIHQ 316
                     ****************************************99888*********88889899*************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ ++++++p+EalaVn++lql++lld++ +  +   + L+l ksl+Pk+v++ e ea++++  Fl+rf  al+y+salf+sle +lp++s +r 
  XP_027355600.1 317 LNHSSFSIQPNEALAVNFMLQLYNLLDDTPTAVE---TALRLAKSLNPKIVTLGEYEASLTRVGFLTRFNTALSYFSALFESLEPNLPSDSPDRF 408
                     **************************99999988...9********************************************************* PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                      vE  llgr+i+ vv        er+e +e+Wr  +e++GF++v+ls++a +qak ll +++ s  y++ e+   ++ l Wkd pL++vS+Wr
  XP_027355600.1 409 QVESLLLGRRITAVVGPDSPG--ERMEDKEQWRVLMESCGFQSVSLSHYAISQAKILLWHYGySSLYSLVESPPGFLsLAWKDVPLLTVSSWR 499
                     ******************999..***************************************9999**9999777777**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQEQEQK QQQQQQQQQQ QQQQQHPLSL LQPWPPTDFT  60
DPFQVPDPGF HFPPLDPHSA AFRFSDFDSD EWMDTLIDTP PDFSLYPFPF QPTPPPSPSP  120
PNQNDAVSSP PLLKALSDCA RLSLSHPHQA AESLSRLSNS ISQHGNPTQR LAFYFSQALS  180
ARISSPKHKP PSPTPSPTSP EDFTLSYKTL NDACPYSKFS HLTANQAILE ATEGSSHIHI  240
VDFGIVQGIQ WPPLLQAFAT RSSGKPLSIR ISAIPAIALG TSPAPSLSAT ANRLSDFAKL  300
LHLNFQFTPV LTPIHQLNHS SFSIQPNEAL AVNFMLQLYN LLDDTPTAVE TALRLAKSLN  360
PKIVTLGEYE ASLTRVGFLT RFNTALSYFS ALFESLEPNL PSDSPDRFQV ESLLLGRRIT  420
AVVGPDSPGE RMEDKEQWRV LMESCGFQSV SLSHYAISQA KILLWHYGYS SLYSLVESPP  480
GFLSLAWKDV PLLTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-176GRAS family protein