PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027353498.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 662aa    MW: 73097.2 Da    PI: 6.0847
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027353498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS443.91.1e-1352996611374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lLl+cAeav++++  la+++L +l+  ++p gd+mqR+aa+fte L arl+ + ++ ++  p+ + s++ns e+l+++++ ++++P++kf+h
  XP_027353498.1 299 LVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTESLTARLTTTKPQQSQPSPSPSPSPSNSLEVLKIYQIVYQACPYIKFAH 393
                     68***********************************************************9999999999************************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaI ea+egeervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+    s+++++etg+ L+++A++l++pfef++ v ++l+dl+
  XP_027353498.1 394 FTANQAIFEAFEGEERVHVIDLDILQGYQWPAFMQALAARPAGAPFLRITGVGP----SADAVRETGRCLTELAHSLRIPFEFHA-VGEQLQDLK 483
                     ******************************************************....9**************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++++ + gEalaVn v +lhr++      +++  ++L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s +r+kv
  XP_027353498.1 484 PHMFNRRVGEALAVNAVNRLHRVP------NNHLGNLLTMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKV 572
                     ***********************9......555667*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+ ++++ei+n+vaceg +r+erhe+lekWr+ +e  GFk v+ls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr++v++SaWr
  XP_027353498.1 573 EQYIFAPEIRNIVACEGIDRIERHERLEKWRKVMEGKGFKGVALSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIVAASAWR 661
                     ****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 662 aa     Download sequence    
MINSLCGSSV SLKSENSRTK LQPTSSNDSV LQSKKNATQS SLDLEQTSLT PPSLNLPSLK  60
FDLDGDVEVQ SPDSSMWESF FADQLDADFM ISSPVRNVPS PQASTYNCNY NYAQGMQGQS  120
LSGCSPPRFS SSQIGAFNSG HKGKGLSPLH RVFNSPNNQF MQHVENLSLP AIEEFLEDYQ  180
GDGCGYSSTK VSSDIGSSFD MSTQIPSILD SLTMPNSSRY CGSVSEDSSV HGGGGGSSQL  240
SQESDMYHHQ MGSMASASLS QALQQERYHE KKQKQQQQET LMLPIPIGIE QEQDSGLQLV  300
HLLLACAEAV AKEEYMLARR YLHHLNRVVT PLGDSMQRVA ACFTESLTAR LTTTKPQQSQ  360
PSPSPSPSPS NSLEVLKIYQ IVYQACPYIK FAHFTANQAI FEAFEGEERV HVIDLDILQG  420
YQWPAFMQAL AARPAGAPFL RITGVGPSAD AVRETGRCLT ELAHSLRIPF EFHAVGEQLQ  480
DLKPHMFNRR VGEALAVNAV NRLHRVPNNH LGNLLTMIRD QAPNIVTLVE QEASHNGPYF  540
LGRFLEALHY YSAIFDSLDA TFPPDSAQRA KVEQYIFAPE IRNIVACEGI DRIERHERLE  600
KWRKVMEGKG FKGVALSPNA VTQSKILLGL YSCDGYRLTE DKGCLLLGWQ DRAIVAASAW  660
RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-98GRAS family protein