PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027352584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 300aa MW: 32133.3 Da PI: 6.747 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.4 | 3.3e-10 | 150 | 194 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+a K + a++L + v+Y+k L XP_027352584.1 150 HSIAERLRRERIAERMKALQELVPSA-----NKTDRAAMLDEIVDYVKFL 194 99***********************8.....6****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 300 aa Download sequence |
MLVLPSVYSE SGGYDFGRSV GSMAIGVGMP LEFNLEHGFL RHQQSSVGGN DYDHLPLNNA 60 NNTTTSSSSS SGITERDSMH MRGLYTTLGQ LHGHGGAQST VPSPAPLLPP HHRQPHHGQP 120 PAPVSVAAVP QASGIRPRVR ARRGQATDPH SIAERLRRER IAERMKALQE LVPSANKTDR 180 AAMLDEIVDY VKFLRLQVKV LSMSRLGGAG AVAQLVADVS PSALEVGEDI VGGANKQAWD 240 KWFNDGTEQE VAKLMEEDVG AAMQFLQSKA LCVMPISLAS TIFGTSISEP PSLLTPESNS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 155 | 160 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G02590.3 | 2e-57 | bHLH family protein |