PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027352321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 248aa MW: 28339.7 Da PI: 6.6656 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.6 | 6e-18 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l ++++ +G g+W+++ar g++Rt+k+c++rw++yl XP_027352321.1 24 KGPWTEEEDSVLFNYITVHGEGHWNSVARSTGLKRTGKSCRLRWLNYL 71 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.6e-16 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_027352321.1 77 RGNITLQEQLLILDLHSRWGNR-WSKIAEHLP-GRTDNEIKNYWRT 120 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MESVDMIRSL SETYASEEEM SITKGPWTEE EDSVLFNYIT VHGEGHWNSV ARSTGLKRTG 60 KSCRLRWLNY LRPSVRRGNI TLQEQLLILD LHSRWGNRWS KIAEHLPGRT DNEIKNYWRT 120 RVVKQAKQLK CDVNSKQFRD TMRFVWMPRM LERIQAQASS GQAQPTSICN TQAHSDPCGV 180 NASLLSEVNA PSLSDSGASY NNREEEGGTL SLWQKRNYSD ISCNGFGGSD LWTDENICFL 240 QQQLADDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 4e-84 | MYB family protein |