PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027352229.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 287aa    MW: 31799.6 Da    PI: 7.7893
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027352229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.8e-19128182256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq  +Lee F+++++++ ++++ LA++l+L+ rqV vWFqNrRa+ k
  XP_027352229.1 128 RKKLRLTKEQSMVLEETFKEHNTLNPKRKQALAEELNLKPRQVEVWFQNRRARTK 182
                     678899***********************************************98 PP
2HD-ZIP_I/II127.45.9e-41128217191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq+ +LEe+F+e+++L+p+rK++la+eL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
  XP_027352229.1 128 RKKLRLTKEQSMVLEETFKEHNTLNPKRKQALAEELNLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 217
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MGEKDDMLGL SLSLSLGVNQ PPPLKVNHMQ NPQQTVPTNH NRTSWADLFQ LPDRSSDMIR  60
GIDVNSAPSM AADCDDDNGV SSPNSAVSSV SGGKRSERDD DNAAAAAERT SCSRGSDDED  120
GGGGDAGRKK LRLTKEQSMV LEETFKEHNT LNPKRKQALA EELNLKPRQV EVWFQNRRAR  180
TKLKQTEVDC EYLKRCCENL TEENRRLQKE VQELRALKLS PHLYMHMNPP TTLTICPSCE  240
RAVSAASSSS ATVHSAQPPS NRNLMGANIR RRVPVNPWPF EGSIPRP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177185RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.19e-80HD-ZIP family protein