PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027351586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25966.4 Da PI: 9.8806 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.5e-11 | 107 | 150 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 + +GV++ k+ +W A I++ +k+++lg+ g+ eeAa ++++a+ XP_027351586.1 107 CVMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAAF 150 568***99..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MVSLRRRRLL GLCSGNSSFV TPLPLYCENL SGSENLNQQA KPKREQPVIS DDASILDSNT 60 VVHEEPGSSN VSGSSSSKEQ LIQQITGPPI KRRKRHRRKN LHNQESCVMR GVYFKNMKWQ 120 AAIKVDKKQI HLGTVGSQEE AAHLYDRAAF MCGREPNFEL PEEEKRELSK FKWDEFLAMT 180 RQAITRKKHK RRLSPGPHNS HNMPLHKDDW ESKQVLSEDA EHEASVS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 186 | 193 | RKKHKRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G13040.1 | 6e-46 | ERF family protein |