PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351239.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 444aa MW: 50786.3 Da PI: 9.975

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	3.8e-17	217	263	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd lv++vk++G + W+ Iar ++ gR +kqc++rw+++l XP_027351239.1 217 KGQWTAEEDSVLVQLVKRFGLKKWSQIARLLN-GRVGKQCRERWHNHL 263 799***************************.***********97 PP
2	Myb_DNA-binding	51.5	2.3e-16	269	311	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W +eEd +l++a+ + G++ W+ Iar+++ gRt++ +k++w+ XP_027351239.1 269 KDSWNEEEDRILIEAHMEVGNK-WAEIARRLP-GRTENTIKNHWN 311 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MEFNPNLSEK TPFRSGIFPE NPCIKSEIPM PEENNTFMYQ NNFHHFQHHP QNGPNHHHLS 60 TEGPSSIINP LFSLAPSSAK PSSHKSTYPN EFLKGGLTLN HHPMAFAPNS TKVEPMHGYP 120 NANNGLWDFS LKLPLHSGAS ASSSSHPRVG PSLSPSLGYG LVQVKPRLQE ELSWVAGNND 180 RLDTDRKALV VDKKQQKQLV QRNSNGKIQH RFTNIIKGQW TAEEDSVLVQ LVKRFGLKKW 240 SQIARLLNGR VGKQCRERWH NHLRPNIRKD SWNEEEDRIL IEAHMEVGNK WAEIARRLPG 300 RTENTIKNHW NATKRRQSAK RHKNRRNGSK GPTTLLQNYI RQVTANEEAQ KELKKRMSKT 360 SMRSESLFRV RYESSEGDFS SEDEVGWSVQ RHVASGGYVP VMDEVASGSA VEDSTMDYEV 420 AMEMVPEVEM KKEMDLMEMI YRKP

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MEFNPNLSEK TPFRSGIFPE NPCIKSEIPM PEENNTFMYQ NNFHHFQHHP QNGPNHHHLS  60
TEGPSSIINP LFSLAPSSAK PSSHKSTYPN EFLKGGLTLN HHPMAFAPNS TKVEPMHGYP  120
NANNGLWDFS LKLPLHSGAS ASSSSHPRVG PSLSPSLGYG LVQVKPRLQE ELSWVAGNND  180
RLDTDRKALV VDKKQQKQLV QRNSNGKIQH RFTNIIKGQW TAEEDSVLVQ LVKRFGLKKW  240
SQIARLLNGR VGKQCRERWH NHLRPNIRKD SWNEEEDRIL IEAHMEVGNK WAEIARRLPG  300
RTENTIKNHW NATKRRQSAK RHKNRRNGSK GPTTLLQNYI RQVTANEEAQ KELKKRMSKT  360
SMRSESLFRV RYESSEGDFS SEDEVGWSVQ RHVASGGYVP VMDEVASGSA VEDSTMDYEV  420
AMEMVPEVEM KKEMDLMEMI YRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	1e-60	MYB family protein