PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027351039.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 366aa MW: 41829.6 Da PI: 6.709

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027351039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.7e-13	179	230	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ L++l+P++ + ++ + a+i A++++k+L+ XP_027351039.1 179 QRMTHIAVERNRRRQMNEHLSVLKSLMPPS---YIQRGDHASIIGGAIDFVKELE 230 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MAGRNSNRDN SVALMDLLLA VMFFGEHLEV NCLEQGLRLK LEEDEEFVVS SLEDNMPFLQ 60 MLQSVESPQF IPFEEPSFQT LLRLKKPWEK VAYIPISETQ SQAMEIESCV THDLVEMQSP 120 HQSQTNHLQH PHQVQDSNKN VIADSAATIK RPKTQVATRE RRKRKRTRQT KNKEDVENQR 180 MTHIAVERNR RRQMNEHLSV LKSLMPPSYI QRGDHASIIG GAIDFVKELE QLLQSLEAHK 240 RMRKNEYVDC RGLFEHGYGM SSSTEEVKRG DEVKAEQKSE TTAIEVTVIQ THVNLKIQCQ 300 KRVGQLIKAI GGLEDLRLTI LHLNIASSEA TVIYSFNLKI EEDSKIVSAS EIAEAVNRIF 360 SSINNS

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MAGRNSNRDN SVALMDLLLA VMFFGEHLEV NCLEQGLRLK LEEDEEFVVS SLEDNMPFLQ  60
MLQSVESPQF IPFEEPSFQT LLRLKKPWEK VAYIPISETQ SQAMEIESCV THDLVEMQSP  120
HQSQTNHLQH PHQVQDSNKN VIADSAATIK RPKTQVATRE RRKRKRTRQT KNKEDVENQR  180
MTHIAVERNR RRQMNEHLSV LKSLMPPSYI QRGDHASIIG GAIDFVKELE QLLQSLEAHK  240
RMRKNEYVDC RGLFEHGYGM SSSTEEVKRG DEVKAEQKSE TTAIEVTVIQ THVNLKIQCQ  300
KRVGQLIKAI GGLEDLRLTI LHLNIASSEA TVIYSFNLKI EEDSKIVSAS EIAEAVNRIF  360
SSINNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	161	166	RRKRKR
2	180	191	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	8e-74	bHLH family protein