PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350812.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 307aa MW: 32562.2 Da PI: 9.5476

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.8	2.2e-39	63	147	2	85
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a++ +s++++s XP_027350812.1 63 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALaAAGTTVSQQGTS 147 789******************************************************************9886444444444422 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MDPKGSKQAQ AQGQEVVPSF LSLPQQQGNN SNNNNNMGEN KPAEVKDFQI VIAEKEENKK 60 QLAPKRSSNK DRHTKVEGRG RRIRMPALCA ARIFQLTREL GHKSDGETIQ WLLQQAEPSI 120 IAATGTGTIP ASALAAAGTT VSQQGTSLSA GLHQKIDELG GSNIGSGSSR TSWQMVGGNL 180 GRPHVATGLW PPHVSGFGFQ TSSGPSNASL ATDSSNYLQK IGFPGFDLPS ATNMGPMSFT 240 SILGGGGNQQ MPGLELGLSQ DGHIGVLNPQ ALSQIYQQMG QASRVHQQQQ QHHQQTPPKD 300 DSQGSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-84	TCP family protein