PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350615.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 356aa MW: 40533.5 Da PI: 10.1391

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.1e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl XP_027350615.1 4 RQRWRAEEDALLRAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia+ ++ gRt+k + +w + XP_027350615.1 59 KGSLTEEEQRLVINLQAKHGNK-WKKIAAQVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MKDRQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV INLQAKHGNK WKKIAAQVPG RTAKRLGKWW EVFKEKQQRE TKGVNRIIDP 120 INDSKYEHIL ESFAEKLVKE RPSPSFAMAA SNSSFLHADA LAPAPALLPS WLSNSNNTAP 180 VRPPSPSVTL SLSPSTVAAP PPWLQPVRGP ENAAPLVLGN VTPHGAVLAF GENMVMSELV 240 ECCKELEEMH HALLAHKKEA AWRLSRVELQ LESEKAGRRR EKIEEIEAKM KALREEQTAA 300 LDRIEAEYRE QLAGLRRDAE SKEQKLAEQW AAKHLRLTKF LEQVGCRSRV TEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MKDRQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV INLQAKHGNK WKKIAAQVPG RTAKRLGKWW EVFKEKQQRE TKGVNRIIDP  120
INDSKYEHIL ESFAEKLVKE RPSPSFAMAA SNSSFLHADA LAPAPALLPS WLSNSNNTAP  180
VRPPSPSVTL SLSPSTVAAP PPWLQPVRGP ENAAPLVLGN VTPHGAVLAF GENMVMSELV  240
ECCKELEEMH HALLAHKKEA AWRLSRVELQ LESEKAGRRR EKIEEIEAKM KALREEQTAA  300
LDRIEAEYRE QLAGLRRDAE SKEQKLAEQW AAKHLRLTKF LEQVGCRSRV TEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-121	MYB family protein