PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350613.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 464aa MW: 53030 Da PI: 9.8985

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1e-15	112	161	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl XP_027350613.1 112 RQRWRAEEDALLRAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 161 89**********************************************97 PP
2	Myb_DNA-binding	35.9	1.8e-11	167	211	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia+ ++ gRt+k + +w + XP_027350613.1 167 KGSLTEEEQRLVINLQAKHGNK-WKKIAAQVP-GRTAKRLGKWWEVF 211 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MLCYVMLCAA LHRTSPRFSL PLCFLLKAQP TTSTSVCFCA LLSSHYTHQG HRFFLLPFSF 60 SPSRCNIWAS WGAILCEKRS LRSPARSFVQ RNHEDFKFQA TDWDLHLEMK DRQRWRAEED 120 ALLRAYVKQY GPREWNLVSQ RMNTPLNRDA KSCLERWKNY LKPGIKKGSL TEEEQRLVIN 180 LQAKHGNKWK KIAAQVPGRT AKRLGKWWEV FKEKQQRETK GVNRIIDPIN DSKYEHILES 240 FAEKLVKERP SPSFAMAASN SSFLHADALA PAPALLPSWL SNSNNTAPVR PPSPSVTLSL 300 SPSTVAAPPP WLQPVRGPEN AAPLVLGNVT PHGAVLAFGE NMVMSELVEC CKELEEMHHA 360 LLAHKKEAAW RLSRVELQLE SEKAGRRREK IEEIEAKMKA LREEQTAALD RIEAEYREQL 420 AGLRRDAESK EQKLAEQWAA KHLRLTKFLE QVGCRSRVTE PNGR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MLCYVMLCAA LHRTSPRFSL PLCFLLKAQP TTSTSVCFCA LLSSHYTHQG HRFFLLPFSF  60
SPSRCNIWAS WGAILCEKRS LRSPARSFVQ RNHEDFKFQA TDWDLHLEMK DRQRWRAEED  120
ALLRAYVKQY GPREWNLVSQ RMNTPLNRDA KSCLERWKNY LKPGIKKGSL TEEEQRLVIN  180
LQAKHGNKWK KIAAQVPGRT AKRLGKWWEV FKEKQQRETK GVNRIIDPIN DSKYEHILES  240
FAEKLVKERP SPSFAMAASN SSFLHADALA PAPALLPSWL SNSNNTAPVR PPSPSVTLSL  300
SPSTVAAPPP WLQPVRGPEN AAPLVLGNVT PHGAVLAFGE NMVMSELVEC CKELEEMHHA  360
LLAHKKEAAW RLSRVELQLE SEKAGRRREK IEEIEAKMKA LREEQTAALD RIEAEYREQL  420
AGLRRDAESK EQKLAEQWAA KHLRLTKFLE QVGCRSRVTE PNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-120	MYB family protein