PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350300.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 306aa MW: 34060 Da PI: 8.0307

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.6e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++k+ Gg+ +W++ +r+ g+ R++k+c++rw +yl XP_027350300.1 14 KGPWTAEEDEILASYIKKNGGHgSWRSLPRMAGLLRCGKSCRLRWTNYL 62 79*****************9*******99**********97 PP
2	Myb_DNA-binding	50.6	4.5e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_027350300.1 68 RGPFTPEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MGRTPCCDKK GLKKGPWTAE EDEILASYIK KNGGHGSWRS LPRMAGLLRC GKSCRLRWTN 60 YLRPDIKRGP FTPEEEKLVI QLHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRLKSM 120 GLDPKTHEPL ASSSSYSFHK AHASISTRHM AQWESARLEA EARLSNESSK FNNTNHNSYG 180 DTKTTDSDYF LRIWNSEVGE AFRNVHHKID NKITSCCNSP ASAGSSSNKC SESITTNAEL 240 GSNIRGISSN TGTVVKQELE WGIHGSDSSS SNDLEDSSDT ALQLLLDFPI NNDMSFLEEN 300 SFVCPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	119	LKKRLKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-123	MYB family protein