PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027350099.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 429aa MW: 47774.1 Da PI: 6.9006

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027350099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_027350099.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	42.2	1.9e-13	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_027350099.1 67 RGAFSQQEENSIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENSIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQKG 120 IDPNTHQPLS EVENDRENPL IADKSNQKTS LGSNEVSVVE AAKPNPITTS MPTERYSLEV 180 SPSSKINNCS STLDRFGTCH DNSIPSCKPS DMVGMGYFSY QHLNYGSTMG LTANPNTQLC 240 FIPSSTSSQM MSSELNSSSM LHSVYPKPTV SLQSNDPSSI SSGDIDGVQN WEAQASTFST 300 NNATKSNGSS SCSIQLQSST NFLDSTALTW GMQQAESAKA EKDAHSSHVP LQAEQEDIKW 360 CEYLNTPFFL GNTVQHQTTH SIYNDEVKPE TGFIAEESST SWHHSQHFQP SDIYTKDLQR 420 FSVAFGQTL

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENSIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQKG  120
IDPNTHQPLS EVENDRENPL IADKSNQKTS LGSNEVSVVE AAKPNPITTS MPTERYSLEV  180
SPSSKINNCS STLDRFGTCH DNSIPSCKPS DMVGMGYFSY QHLNYGSTMG LTANPNTQLC  240
FIPSSTSSQM MSSELNSSSM LHSVYPKPTV SLQSNDPSSI SSGDIDGVQN WEAQASTFST  300
NNATKSNGSS SCSIQLQSST NFLDSTALTW GMQQAESAKA EKDAHSSHVP LQAEQEDIKW  360
CEYLNTPFFL GNTVQHQTTH SIYNDEVKPE TGFIAEESST SWHHSQHFQP SDIYTKDLQR  420
FSVAFGQTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-111	MYB family protein