PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027349441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 223aa MW: 25472.5 Da PI: 9.8151 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 27 | 74 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd +l ++v+ +G g+W+++ar g++R++k+c++rw++yl XP_027349441.1 27 KGPWSIEEDTILTNYVATHGDGRWNSVARSSGLKRSGKSCRLRWLNYL 74 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.4e-15 | 80 | 123 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+ ++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_027349441.1 80 RGNITLQEQITILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 123 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MDYAKVKKGG SIEQVQQSGE DETSIRKGPW SIEEDTILTN YVATHGDGRW NSVARSSGLK 60 RSGKSCRLRW LNYLRPDVRR GNITLQEQIT ILDLHSRWGN RWSKIAQHLP GRTDNEIKNY 120 WRTRVIKQAK QLKCDVDSKQ FKDALRYVWL PRLIERIQPP SQTHPSPRVH GSESSGSGTE 180 WVKQSSSGVE VDHNTSLNAF GGGGGGEIME NLWEDENIWF NIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 5e-78 | MYB family protein |