PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027349418.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 400aa MW: 45242.9 Da PI: 4.534 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_027349418.1 14 KGRWTAEEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50 | 6.8e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE+ ++ ++++ lG++ W++Ia++++ gRt++++k++w+++l XP_027349418.1 67 RGNISVEEENIIMKLHASLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence |
MGRAPCCAKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SVEEENIIMK LHASLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIYSSR 120 GTSNKEIITL PPKRKGGRTS RWAMKRSKTY AQKSTNLLER PKPSDTDHIH NNTEAIPLPP 180 TPTLESENLS STIMDLMVLD EHEREELGDG PSTSAHDHQE STIQEENEGT VLLQCLNGEK 240 NGNLTLGPHD EDIIIINDGE VWNFNDILDT SCVLEASGEL TCINDDNEVV DVMGNERGDT 300 CNDKMGSSEE ERESSGNHST NGELHSCASM ASGLDDCNWD WERVMQTDHK DESVLWEHSE 360 DLLSWLWEDQ DWEKDFQNFG EIGPEEQNAF VSWFLSEADV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 1e-73 | MYB family protein |