PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027349045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 228aa MW: 26167.4 Da PI: 9.8973 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.6 | 8.4e-52 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd++k++PwdLp e+e yfFs+++ ky++g+r+nrat+sgyWkatg dk+++++ XP_027349045.1 14 LPPGFRFHPTDEELVVQYLKRKVFSFPLPA-SIIPEVDVCKSDPWDLPGD---LEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIITS 104 79****************************.89***************54...46799*********************************9987 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+g+ p+g++tdW+mheyrl XP_027349045.1 105 kGNHVVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138 57788***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence |
MEKVNLVKNG ELRLPPGFRF HPTDEELVVQ YLKRKVFSFP LPASIIPEVD VCKSDPWDLP 60 GDLEQERYFF STKEAKYPNG NRSNRATNSG YWKATGLDKQ IITSKGNHVV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRLLS SSQSQSSMEN WVLCRIFLKR RSGAKNGEDS LDNMSSRKVR 180 NSRVVFYDFL AQNKTDSSSS ATSGITHESD EHEESSSSNS FPYFRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 5e-98 | NAC family protein |