PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027349041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 26704.4 Da PI: 5.1998 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.1 | 4.5e-18 | 104 | 154 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r+++g+f+tae+Aa a+++a+ + +g XP_027349041.1 104 VYRGVRKRP-WGKFAAEIRDSTRNG--VRVWIGTFDTAEDAALAYDQAAFSTRG 154 69*******.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MDFDSPLFLN HNLNLFTENS SVSGDPFSWD YDFVFFNDDN NTLPLNFSEN HSQSQQTKES 60 SSASNSSLGS VESQEVSSNT NYAHMSETRV PSASESQAPK ESRVYRGVRK RPWGKFAAEI 120 RDSTRNGVRV WIGTFDTAED AALAYDQAAF STRGSLAVLN FPEEVVKASL REMQSKPWEE 180 GSSPVLALKR KHTMRRKSTK PSKKKTKRDE LELSSSENVL VLEDLGAEYL EQLLSLTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 1e-37 | ERF family protein |