PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 28797.4 Da PI: 9.4556 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.7 | 4.7e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri++++ rqvtfskRr g+lKKA ELS+LCdaev +i+fs +gkly+y+s XP_027348390.1 10 RINDSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIVFSCSGKLYDYAS 59 8***********************************************86 PP | |||||||
2 | K-box | 80.3 | 4.7e-27 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e a L+++++ +q+ R+l+Ge+L+ L +keL +Le++Le slk iR+kK+e+l+++++el +ke +en +L++k+ XP_027348390.1 81 NPASEVKFWQRETASLRQQVHYMQECRRQLMGEELSGLGIKELGNLENRLEMSLKVIRKKKDEILTDEVKELHQKESLSLQENVELHRKI 170 567889**********************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGKIVIQR INDSTSRQVT FSKRRSGLLK KARELSILCD AEVGLIVFSC SGKLYDYAST 60 SMKSVIERYH KAKEDHHQLI NPASEVKFWQ RETASLRQQV HYMQECRRQL MGEELSGLGI 120 KELGNLENRL EMSLKVIRKK KDEILTDEVK ELHQKESLSL QENVELHRKI SLICKENAEL 180 QKVLEANSTK EDIATSDPPY TMNHGYDLIA PISLQLRQPH PQHSESPAKA MKLGYYLKLM 240 LLIIQLGSIK I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 7e-89 | MIKC_MADS family protein |