PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 230aa MW: 26000.4 Da PI: 8.9834 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.8 | 1.4e-14 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++q+ +W+t ++ g+ R++k+c++rw +yl XP_027348312.1 13 KGAWSKQEDQKLIDYINQHADVCWRTLPQAAGLLRCGKSCRLRWINYL 60 79******************99**********99************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.4e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ XP_027348312.1 66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 110 8999******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MRNPSSDIKD LNKGAWSKQE DQKLIDYINQ HADVCWRTLP QAAGLLRCGK SCRLRWINYL 60 RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH IRRKLISKGI 120 DPNNHRLKNH KIPSIHNSPT SDCSKSLDLK DTCKNETSKL PHVNNYGEVS DAASGEAESS 180 FALPDLNLDL TIGIPLSSPS ISENNLKLFH ESTSPRKLHF ASPSTLLLFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 2e-73 | MYB family protein |