PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | WOX | ||||||||
Protein Properties | Length: 245aa MW: 26928.1 Da PI: 6.6589 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.6 | 3.3e-21 | 25 | 84 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ Le+l+++ ++psaee+++++++l +++ ++V++WFqN++a++++ XP_027348274.1 25 SRWNPTKEQISMLENLYKQgIKTPSAEEIQQITARLrvygHIEGKNVFYWFQNHKARQRQ 84 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115 | 3.6e-37 | 23 | 86 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 a++RW+Pt+eQi +Le+lyk+G++tP++eeiq+ita+L+ yG+ie+kNVfyWFQN+kaR+rqkq XP_027348274.1 23 ASSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRVYGHIEGKNVFYWFQNHKARQRQKQ 86 579***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEGGNNEGVQ TGVGMGGSNG AGASSRWNPT KEQISMLENL YKQGIKTPSA EEIQQITARL 60 RVYGHIEGKN VFYWFQNHKA RQRQKQKQET IAYYNRYLHR PQPFFSPPNA ICAPCCIPQP 120 QGEIGFYPQH PKMLVPVGFR RNPAEKVVPA GMPSICNGPM VYGGMQQKIP DCNFSYSNQE 180 TLDLFPLHPT GILEGKTTDQ VSSLASVSPD SSTDTPSGSS DINEEDACPG NQPFFDFFTT 240 SGQGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 1e-43 | WOX family protein |