PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | TCP | ||||||||
Protein Properties | Length: 167aa MW: 18084.3 Da PI: 6.7988 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 99 | 8.9e-31 | 34 | 120 | 5 | 89 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg..k 89 + ++++hTkv+gR RRv ls +caar+F+L+ eLG+++ ++ti WLl+qa+p+i ++tg++ ss++ ++a++s ss+++++ + + XP_027348256.1 34 SRGNKDRHTKVNGRERRVLLSPLCAARVFQLTGELGHKTHGETIGWLLRQAEPSIVAATGSGVSSSMVASASASASSEDKNNVQdvD 120 5678*********************************************************88888666666666666655554331 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MSSESASQNQ SKPMNSETPL SLKPINTKLK PWRSRGNKDR HTKVNGRERR VLLSPLCAAR 60 VFQLTGELGH KTHGETIGWL LRQAEPSIVA ATGSGVSSSM VASASASASS EDKNNVQDVD 120 SVPMSAGNGV KSEEAILPFE FDLLNNFDAE FSDNDMAMLQ SFMTRLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 2e-21 | TCP family protein |