PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 25944.7 Da PI: 5.1625 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.8 | 4.5e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++lvd+++++G +W++ ++ g+ R++k+c++rw++yl XP_027348210.1 14 KGTWTPEEDKKLVDYITRYGHWNWRLLPKFAGLARCGKSCRLRWLNYL 61 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 59.5 | 7.2e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE+e ++++++ lG++ W++Ia+ m+ gRt++++k++w++ XP_027348210.1 67 RGNYTQEEEETIIKLHQDLGNR-WSAIAAQMP-GRTDNEIKNHWHTN 111 899*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MVRTPVCDKN GLKKGTWTPE EDKKLVDYIT RYGHWNWRLL PKFAGLARCG KSCRLRWLNY 60 LRPNLKRGNY TQEEEETIIK LHQDLGNRWS AIAAQMPGRT DNEIKNHWHT NLKKRSQEYS 120 VAETEVSKSK DQSPTQLNSD PFQSFQTTQE SSPLSQHSSS TTSGSTSNEN LSLEDEFAFL 180 DADAGLVSGN FWVEPYLLEL DISYDLSEPE HFCPVFDAEL WSYDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 6e-63 | MYB family protein |