PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 330aa MW: 37511.4 Da PI: 4.7205 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ +r g+ R++k+c++rw +yl XP_027348209.1 14 KGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYL 61 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 62.5 | 8.2e-20 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE+e++++ +k+lG++ W++Ia++++ gRt++++k++w++ XP_027348209.1 67 RGNFTQEEEERIIRMHKKLGNR-WSAIAAELP-GRTDNEIKNHWHTT 111 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MVRTPSCDKS GLRKGTWTPE EDRKLIAYVT RYGCWNWRQL PRFAGLARCG KSCRLRWMNY 60 LRPNIKRGNF TQEEEERIIR MHKKLGNRWS AIAAELPGRT DNEIKNHWHT TLKKRFQENT 120 VTNEEVKASK TKDKESKKGK DTVSNNGVTV LQVNPPATSQ ISDNTGSLSP LSSSSDFSSI 180 SSDHSTAASN ENFMFEDDLG FLDEFTEPVS ENFWTDLYLD DISNNTTMPS DINGAFESTD 240 ATQILDSRTL SPHQSTSESM VVENEFGSFL DAYTEPTVDN FWTQPYVADM SHVPSELLVP 300 SVAESEYFST VYDADLWGQS NLYDEHLSLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 1e-58 | MYB family protein |