PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 241aa MW: 27699.9 Da PI: 5.6013 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEde+l v+++G +W+ ++ g+ R++k+c++rw++yl XP_027348208.1 14 KGAWSREEDERLRVFVQKHGHSNWRQLPKFAGLARCGKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 59.4 | 7.8e-19 | 68 | 111 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g++T+eE+e+++++++++G++ W+ Ia++++ gRt++++k++w+++ XP_027348208.1 68 GNFTKEEEEIIIKLHQEFGNR-WSVIAEKLP-GRTDNEIKNHWHSH 111 89*******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MVRAAFYDKN GLKKGAWSRE EDERLRVFVQ KHGHSNWRQL PKFAGLARCG KSCRLRWLNY 60 LKPNLKHGNF TKEEEEIIIK LHQEFGNRWS VIAEKLPGRT DNEIKNHWHS HIKKSLKSHE 120 ITPYVSKIDD NSVEENLNET NEFVKSKSPC ADVGDSLYHI LESSLTVSTE TSEGDNTSNV 180 AQSTVNCSIS KEDTAPPLVT YEEFIGDFWT QPFLVEDQDT YTDEICNAES LILNFDGTYL 240 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 6e-57 | MYB family protein |