PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027348111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 200aa MW: 23330.7 Da PI: 9.5515 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.7 | 4e-25 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i++ + rqvtf+kRr+g++KKAeELSvLCda+va+i+f s g+l+ ys+ XP_027348111.1 10 KIDDATTRQVTFAKRRKGLFKKAEELSVLCDADVALIVFNSYGRLFHYSN 59 699*********************************************85 PP | |||||||
2 | K-box | 43.4 | 1.4e-15 | 88 | 166 | 16 | 95 |
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 +++ a+L + +e+ ++R+l+GedLe L+++eLqqLe+ e+ l+++ +kK+e +++ ++ l+ kek+l e+n++L XP_027348111.1 88 LISNNNARLSEVYEKS-LQLRQLKGEDLEGLDIEELQQLERSFETRLRHVIEKKEEKIINDMRILRGKEKQLMEANERLL 166 4455556666666552.3469********************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MGKKKIQINK IDDATTRQVT FAKRRKGLFK KAEELSVLCD ADVALIVFNS YGRLFHYSNL 60 RMKEVLERHH LYSKNWAKLE QPSPELELIS NNNARLSEVY EKSLQLRQLK GEDLEGLDIE 120 ELQQLERSFE TRLRHVIEKK EEKIINDMRI LRGKEKQLME ANERLLNHGI VTDISTGKRH 180 SSENNGNSDP WLKLGLPYSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 7e-54 | MIKC_MADS family protein |