PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346838.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 395aa MW: 44959.6 Da PI: 9.4697

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2e-13	19	63	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEd++l + + +G+++W+ Ia+++ +t qc+ rw++yl XP_027346838.1 19 TWTREEDDILREQIGIHGTENWAIIASKFE-DKTTRQCRRRWYTYL 63 6***************************.***********97 PP
2	Myb_DNA-binding	45.8	1.4e-14	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg W++eEd ll +a k++G++ W+ Ia+ + gRt++ +k+r+ + XP_027346838.1 69 RGGWSPEEDRLLCEAQKLFGNR-WTEIAKVVS-GRTDNAVKNRFST 112 789*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MKKQQCSEES KKKERHIVTW TREEDDILRE QIGIHGTENW AIIASKFEDK TTRQCRRRWY 60 TYLNSDFKRG GWSPEEDRLL CEAQKLFGNR WTEIAKVVSG RTDNAVKNRF STLCRKREKI 120 AALAKENSTS YINSNNKRII FPNGYNTDAT LKSAVPIKKM RRAHIPDDTE KIKFEDRSHL 180 RNKVQVNQQP SPRTPFAVLA ENSLNANNLP DQHDVCASKF NGSAQNNNIQ GTFLKKDDMD 240 PSFENARKVL KEFLNITKES DIAGHKIPEV PLVDLKELIE DLKSGNKEGQ PCWRQVECYE 300 DSPGSSEYST GSTLLPWSAR NTLEHSLHQG IGIEMKSRQF GDEKGVGGGE KGVHSTTNVD 360 QRKKLLKENT RDGISIHQGK CQPVTTATLQ KSLTT

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MKKQQCSEES KKKERHIVTW TREEDDILRE QIGIHGTENW AIIASKFEDK TTRQCRRRWY  60
TYLNSDFKRG GWSPEEDRLL CEAQKLFGNR WTEIAKVVSG RTDNAVKNRF STLCRKREKI  120
AALAKENSTS YINSNNKRII FPNGYNTDAT LKSAVPIKKM RRAHIPDDTE KIKFEDRSHL  180
RNKVQVNQQP SPRTPFAVLA ENSLNANNLP DQHDVCASKF NGSAQNNNIQ GTFLKKDDMD  240
PSFENARKVL KEFLNITKES DIAGHKIPEV PLVDLKELIE DLKSGNKEGQ PCWRQVECYE  300
DSPGSSEYST GSTLLPWSAR NTLEHSLHQG IGIEMKSRQF GDEKGVGGGE KGVHSTTNVD  360
QRKKLLKENT RDGISIHQGK CQPVTTATLQ KSLTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-109	MYB family protein