PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346540.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 296aa MW: 33182.3 Da PI: 6.8294

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	134.9	3e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk lrrkC+++Cv+apyfp ++p++f++vh++FGasnv+kllk+l+ ++r+da++sl+yeAear+rdPvyG+vg+i+ lq++l+q +++l XP_027346540.1 7 PCAACKSLRRKCTRECVFAPYFPPDNPQRFECVHRVFGASNVTKLLKELSATQRDDAVKSLAYEAEARIRDPVYGCVGFISVLQHRLRQIQTDLY 101 7********************************************************************************************99 PP DUF260 96 llkee 100 +k+e XP_027346540.1 102 NAKKE 106 98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MSSPNSPCAA CKSLRRKCTR ECVFAPYFPP DNPQRFECVH RVFGASNVTK LLKELSATQR 60 DDAVKSLAYE AEARIRDPVY GCVGFISVLQ HRLRQIQTDL YNAKKELASY ISPQAMQVLL 120 ANPGMLSSSG VLMPHLHQSV FNNFGDNNVP QPVLVGHGGG QLMIRDSQQQ EFLQAQQLAA 180 DREQQHQHPY QQQVLLRNYE QQEEFMKFNN GLEHVGVFGN QMGGTGGELS PSLALGTFEN 240 VAPYQMQQQQ QGEHHVPHSH LHPIEAQLLL SPQHQHTQQS QLHSEITEDT RSIGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-61	LBD family protein