PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027346402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 437aa MW: 47966.9 Da PI: 6.3783 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.7 | 1.1e-27 | 174 | 228 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++ XP_027346402.1 174 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 228 5689*****************.********************************86 PP | |||||||
2 | Myb_DNA-binding | 37.8 | 4.4e-12 | 177 | 226 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ XP_027346402.1 177 VDWTPELHRRFVQAVEQLGVDkaVPSRILEIMGiDCLTRHNIASHLQKYR 226 57********************************889************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 437 aa Download sequence |
MLAVSPFRST KDEKIQGAME GFAMATTTST NDVDFGELSE GNLLESIDFD DLFVGINVDG 60 DVLPDLEMFG EFSVSAAEES EMNDSVENKV ENNDTQNIDI TTSSKKEDED KTSCCAASGQ 120 DLGSNQGEEI VSKRDESVVV NSSLKEGGKG RKSSSAQSKN NSSNNNNNPQ GKRKVKVDWT 180 PELHRRFVQA VEQLGVDKAV PSRILEIMGI DCLTRHNIAS HLQKYRSHRK HLLAREAEAA 240 SWSQRRQMYG GGGKREVSPW PAPIMGFPPI NPMHHFRHLH VWGHPSMDQS FMHMWPKHLP 300 QHSPPPPPPH SWAPTAAPPA PQDPSFWHAQ HQQAPNALIP GTPCFPQPLT TTRFGCPPVP 360 GIPPHAMYKP PDHATAVPPP RPLFDFHPSK ESIDSAIGDV LSKPWLPLPL GLKAPALDSV 420 LSELQRQGIP NIPPSSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G20570.1 | 7e-82 | G2-like family protein |