PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027346217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | YABBY | ||||||||
Protein Properties | Length: 182aa MW: 20421.3 Da PI: 8.6048 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 212.1 | 1.8e-65 | 6 | 159 | 5 | 170 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP++sl+++vtvrCGhC++llsvn+ + + + ++ ++++++l +ee + k+ ++++++ +++ XP_027346217.1 6 MATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLPTFPPQDP------QSQKQHLSFEEPSSKELGSSSKCN--KIAP- 91 579*******************************************999998888885......334455555555555544444433..3333. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 e ++e pr+pp irP ekr rvPsaynrfikeeiqrikasnPdishreafs aaknWahfP+ihfgl XP_027346217.1 92 --FEAVEHEQPRIPP-IRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGL 159 ..2456778899999.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MSMDLMATER VCYVHCNFCN TILAVSVPYS SLLTIVTVRC GHCANLLSVN MGASLPTFPP 60 QDPQSQKQHL SFEEPSSKEL GSSSKCNKIA PFEAVEHEQP RIPPIRPTEK RHRVPSAYNR 120 FIKEEIQRIK ASNPDISHRE AFSSAAKNWA HFPHIHFGLK LDGNKQAKLD QGEGTEKSKG 180 FY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 5e-82 | YABBY family protein |