PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027345753.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 291aa MW: 31298.5 Da PI: 9.0535

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027345753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.1	1.2e-19	13	58	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G+++W++I+r ++ gR++k+c++rw + XP_027345753.1 13 KGPWSPEEDEALQKLVERHGPRNWTLISRSIP-GRSGKSCRLRWCNQ 58 79****************************.*********985 PP
2	Myb_DNA-binding	54.1	3.6e-17	67	109	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a++++G++ W+tIar + gRt++ +k++w++ XP_027345753.1 67 AFTPEEDDTIIRAHARFGNK-WATIARLLS-GRTDNAIKNHWNST 109 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MMAITRKDMD RIKGPWSPEE DEALQKLVER HGPRNWTLIS RSIPGRSGKS CRLRWCNQLS 60 PQVEHRAFTP EEDDTIIRAH ARFGNKWATI ARLLSGRTDN AIKNHWNSTL KRKCASIVIA 120 DDPTTAAAGG FSPQPLKRSV SAGAAVPPGS PSGSDVSDSS APGAVSPSYV FRPVPVRPAV 180 ETTSSCDDGP PTSLSLSLPG VDSSEVSNRA TAVPANPLPV MPVTAVTAQL AAPEVGLGAL 240 NLSAEFMAVM HEMIRKEVRS YMEQQNGMCF QGVDGFRNVS VKRIGISRVD S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	3e-86	MYB family protein