PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027345442.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 626aa MW: 68427.3 Da PI: 5.3393

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027345442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	449	494	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_027345442.1 449 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 494 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MTEYRSPPTM NLWTDDNSSV MEAFMSSSDL SSLAPPPPPT PTQSQPLFNQ ETLQQRLHAL 60 IEGARESWTY AIFWQSSYDY SGASLLGWGD GYYKGEEDKG KGKATKTTSS AEQDHRKKVL 120 RELNSLISGP SASGDDAVDE EVTDTEWFFL VSMTQSFVNG SGLPGQAFFN SSPVWVTGAD 180 RLSGSACERA RQGQVFGLQT LVCIPSANGV VELASTEVIF QNADLMNKVR VLFNFNNLDA 240 GSWPLNSVTT DQGENDPSSL WLSDPSGIEI RDSAANTVAP DSANTGTVSK TLQFETPGSS 300 TLTEAPSAVH VPNSHQQRQQ SQSQGLFPRE LNFSSSLKPE SGEILSFGES KKNSYNGNFF 360 PSVVAEENKK RRSPVSRSSI DDGMLSFTSG VILPSSNLKS GGGGGGDSDH SDLEASVVKE 420 ADSSRVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNVSKMDK 480 ASLLGDAISY INELKSKLHG LESEKGELEK QLDSTKKELE LASKHPPPPP PSDIEAKKMT 540 TKLVDLDIDV KIIGWDAMIR IQCSKKNHPA ARLMAALKDL DLEVHHASVS VVNDLMIQQA 600 TVNMGNRFYT QEQLLLALSS KVGDAR

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MTEYRSPPTM NLWTDDNSSV MEAFMSSSDL SSLAPPPPPT PTQSQPLFNQ ETLQQRLHAL  60
IEGARESWTY AIFWQSSYDY SGASLLGWGD GYYKGEEDKG KGKATKTTSS AEQDHRKKVL  120
RELNSLISGP SASGDDAVDE EVTDTEWFFL VSMTQSFVNG SGLPGQAFFN SSPVWVTGAD  180
RLSGSACERA RQGQVFGLQT LVCIPSANGV VELASTEVIF QNADLMNKVR VLFNFNNLDA  240
GSWPLNSVTT DQGENDPSSL WLSDPSGIEI RDSAANTVAP DSANTGTVSK TLQFETPGSS  300
TLTEAPSAVH VPNSHQQRQQ SQSQGLFPRE LNFSSSLKPE SGEILSFGES KKNSYNGNFF  360
PSVVAEENKK RRSPVSRSSI DDGMLSFTSG VILPSSNLKS GGGGGGDSDH SDLEASVVKE  420
ADSSRVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNVSKMDK  480
ASLLGDAISY INELKSKLHG LESEKGELEK QLDSTKKELE LASKHPPPPP PSDIEAKKMT  540
TKLVDLDIDV KIIGWDAMIR IQCSKKNHPA ARLMAALKDL DLEVHHASVS VVNDLMIQQA  600
TVNMGNRFYT QEQLLLALSS KVGDAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	431	439	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein