PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345230.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family SRS
Protein Properties Length: 415aa    MW: 43831.9 Da    PI: 8.1451
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702215.21.6e-661983572154
          DUF702   2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaes 96 
                     +sg+++CqdCGnqakkdC+h+RCRtCCksrgfdC th+kstWvpaa+rrerq +++ a++ +  + +++ sk++r   +++++++s+t++s++++
  XP_027345230.1 198 NSGGSTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHLKSTWVPAARRRERQLMTSVAAAGS--TGSTSGSKKPRLV-ASQTTTTSHTSTSNTTP 289
                     57889**********************************************88877765555..4477888999976.888999999******** PP

          DUF702  97 kkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                     +++++t s          lP +v+++avf+cvrv++vddge+e+aYq++v+igGhvfkG+LydqG+e+
  XP_027345230.1 290 PRSFDTGSshqdasfkesLPCQVRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGFLYDQGAED 357
                     *****99999*******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MSRQQQQKQE QKTHSNKVVA TTRRFPSDSG AFADWSATPS AAVSGRADDL SLGFNASSAA  60
VHGGAASGMW PGASRSFNYN LAPHHDIFVV APSSFHHHHH NDAVLSDPNN NGSTSVGVNV  120
IPLLTATPCL ASPNIILDNE GVMGNNSRNR IQLWQDHESQ HQQQPSNYLK KHGHGVIEHN  180
SNSGDGNNLI LQSGSVTNSG GSTCQDCGNQ AKKDCSHRRC RTCCKSRGFD CPTHLKSTWV  240
PAARRRERQL MTSVAAAGST GSTSGSKKPR LVASQTTTTS HTSTSNTTPP RSFDTGSSHQ  300
DASFKESLPC QVRAPAVFKC VRVTAVDDGE DEYAYQAVVK IGGHVFKGFL YDQGAEDRDG  360
YPNISELHLG GGGGGSSGNV GSGGRNGPMM DPSEVYAASS GGLLGGSSNY GNPIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.43e-74SRS family protein