PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 222aa MW: 25909.8 Da PI: 8.6374 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.6 | 5.2e-17 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+ +G+++W++Ia+++ gR++k+c++rw++ XP_027343916.1 4 RGHWRPAEDDKLRELVEHYGPHNWNAIAEKLR-GRSGKSCRLRWFNQ 49 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57.3 | 3.7e-18 | 56 | 100 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eE+e+lv ++ +G++ W+ Iar ++ gRt++ +k++w+ XP_027343916.1 56 RSPFTEEEEERLVASHRIHGNR-WAVIARLFP-GRTDNAVKNHWHVM 100 789*******************.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MCSRGHWRPA EDDKLRELVE HYGPHNWNAI AEKLRGRSGK SCRLRWFNQL DPRINRSPFT 60 EEEEERLVAS HRIHGNRWAV IARLFPGRTD NAVKNHWHVM MARVRRERSK LYAKHPALPR 120 TNPHHNSNYD TTTFASSFVD KCSPFQFTNN LHFRVPSYCS TMLQDRSQSV EFYDFLQVNT 180 DSNKSEVTDN VKRDDEEVNQ DAAGSKNKED VSFIDFLSVG SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 1e-87 | MYB family protein |