PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 221aa MW: 25734.1 Da PI: 7.2346 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.4 | 2.9e-17 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +v+++G +W++ ++ g+ R++k+c++rw +yl XP_027343340.1 12 KGAWTPEEDKKLVAYVTRYGHWNWTLLPKFAGLERCGKSCRLRWMNYL 59 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 59.1 | 9.7e-19 | 65 | 110 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEde + +++++lG++ W++Ia+ ++ gRt++++k++w+++l XP_027343340.1 65 RGNFTQEEDETIMKLIQRLGNR-WSAIAAQLP-GRTDNEIKNYWHTHL 110 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MKIIPDKSGL RKGAWTPEED KKLVAYVTRY GHWNWTLLPK FAGLERCGKS CRLRWMNYLR 60 PNIKRGNFTQ EEDETIMKLI QRLGNRWSAI AAQLPGRTDN EIKNYWHTHL KKRYQQNEKS 120 EVSKSKDESP LQQMPKHADA LPSTSKSTQL SITTDHSNEY FVLEDEFALL NAYSEPLNGN 180 FWLEPYMPDI SIAPCEDLDL GAQTHCFSPL RDVPLWSHDH D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06180.1 | 6e-56 | MYB family protein |