PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027342714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 28197.2 Da PI: 4.9636 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.9 | 5e-18 | 52 | 102 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a++ ++g XP_027342714.1 52 PVYRGVRMRA-WGKWVSEIREPRK---KNRIWLGTFATPEMAARAHDVAALTIKG 102 68*****998.**********854...59*********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MAELPSSPSS SSQPCLPIVT IESHKHSSME AQLPGPDQKK PRRARDSTSK HPVYRGVRMR 60 AWGKWVSEIR EPRKKNRIWL GTFATPEMAA RAHDVAALTI KGNSAILNFP ELAASLPRPD 120 SNSPRDVQAA AAKAAAMDVF DPQTTSHLSS SSSSSSSSSL SQSSSSSSSL AVSSGSGDPS 180 TPEELDEIVE LPSLGTSFEL PDPSNELVFF DPVDGWPYSH PWCHGIYDDR DCGGYFIGDQ 240 ISMQDSESVI LCGFEGSLWQ Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-54 | ERF family protein |