PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342270.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 354aa MW: 39592.4 Da PI: 7.8542

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	2.9e-09	177	224	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_027342270.1 177 SHSLAERVRREKISERMKMLQRLVPGC----DKVTGKALVLDEIINYVQSLQ 224 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MAAFSYQYYH PFLVDSTCFP TNTTMSSLEE HALMNTPLPL PSHHQYIHSI HQETSSSVTN 60 QETSCVDQSS KVTISDTEPS VVKNPSPETS MVVDKLEKGE QVTQKVSPTE KKKRARNGSS 120 LVSPLSKDSR EGGNKKQKKS NGGVKPKEEK KDQKKGAEEP PTGYIHVRAR RGQATDSHSL 180 AERVRREKIS ERMKMLQRLV PGCDKVTGKA LVLDEIINYV QSLQNQVEFL SMKLASVNPM 240 FFDLSMDLDT LLVRPDQKLN NIASASPIVP CAPQCRPNQT TAFADTATLT TTNNNTFATA 300 NNDYLLDYSS SLFLQGQRSN VFFEYTGGQF WDVEDQRPKF LNPYGFDNNS CSFN

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MAAFSYQYYH PFLVDSTCFP TNTTMSSLEE HALMNTPLPL PSHHQYIHSI HQETSSSVTN  60
QETSCVDQSS KVTISDTEPS VVKNPSPETS MVVDKLEKGE QVTQKVSPTE KKKRARNGSS  120
LVSPLSKDSR EGGNKKQKKS NGGVKPKEEK KDQKKGAEEP PTGYIHVRAR RGQATDSHSL  180
AERVRREKIS ERMKMLQRLV PGCDKVTGKA LVLDEIINYV QSLQNQVEFL SMKLASVNPM  240
FFDLSMDLDT LLVRPDQKLN NIASASPIVP CAPQCRPNQT TAFADTATLT TTNNNTFATA  300
NNDYLLDYSS SLFLQGQRSN VFFEYTGGQF WDVEDQRPKF LNPYGFDNNS CSFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	138	KKKRARNGSSLVSPLSKDSREGGNKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	8e-50	bHLH family protein