PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027341871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 199aa MW: 22425.2 Da PI: 9.5221 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.9 | 5.6e-28 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krie+ks rqvtfskRrng++KKA ELS+LCda+va++ifsstgkl+e + XP_027341871.1 9 KRIEDKSTRQVTFSKRRNGLMKKARELSILCDAKVALVIFSSTGKLFELC 58 79********************************************9965 PP | |||||||
2 | K-box | 41.3 | 6.4e-15 | 112 | 167 | 44 | 99 |
K-box 44 esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e Ls+ eL++Le+ ++++l++iRs K +l++e++ +l+kke+ l++en+ L+k+++ XP_027341871.1 112 EHLSVTELMELEKLIHTALSQIRSAKVRLMIESVVNLKKKEHILSKENELLEKQIA 167 689**************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MGKKKVEMKR IEDKSTRQVT FSKRRNGLMK KARELSILCD AKVALVIFSS TGKLFELCNG 60 DSLTKVLQRY WDCLEASDAA SKPELLFEIA DIWSGAAFSQ LVKRHFGVSE PEHLSVTELM 120 ELEKLIHTAL SQIRSAKVRL MIESVVNLKK KEHILSKENE LLEKQIAAQE KASDIDKAIT 180 RSMEGAKTDP VVHNLFPGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.2 | 3e-41 | MIKC_MADS family protein |