PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341538.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family YABBY
Protein Properties Length: 180aa    MW: 20224.9 Da    PI: 8.7008
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341538.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY218.81.7e-6761565170
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                      ++e+vCyv+CnfCnt lavsvP +sl+++vtvrCGhC++llsvn+  + q+ ++++       ++++++l  +e++ k+  ++++++     s+
  XP_027341538.1   6 MATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQTFPSQDP------QRQHQHLSIQESSSKELGSSSKCK-----SF 89 
                     579****************************************************996......344555555555544444433333.....32 PP

           YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                        e  d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  XP_027341538.1  90 ---EPVDHEQPRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 156
                     ...345678899999.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MSMDMMATER VCYVHCNFCN TTLAVSVPCS SLLTIVTVRC GHCANLLSVN MGASLQTFPS  60
QDPQRQHQHL SIQESSSKEL GSSSKCKSFE PVDHEQPRIP PIRPPEKRQR VPSAYNRFIK  120
EEIQRIKASN PDISHREAFS TAAKNWAHFP HIHFGLKLDG NKQAKLDQQG DGTQKSNGFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-71YABBY family protein