PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341536.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

YABBY

Protein Properties

Length: 182aa MW: 20466.2 Da PI: 8.7008

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	230.3	4.7e-71	6	158	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCnt lavsvP +sl+++vtvrCGhC++llsvn+ + q+ ++++ ++++++l +e++ k+ + s++ +s XP_027341536.1 6 MATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQTFPSQDP----QLQRQHQHLSIQESSSKELGS-----SSKCKS- 90 579**************************************************995....223333444444443333333.....333333. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 e d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_027341536.1 91 --FEPVDHEQPRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 158 ..2345778899999.9**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MSMDMMATER VCYVHCNFCN TTLAVSVPCS SLLTIVTVRC GHCANLLSVN MGASLQTFPS 60 QDPQLQRQHQ HLSIQESSSK ELGSSSKCKS FEPVDHEQPR IPPIRPPEKR QRVPSAYNRF 120 IKEEIQRIKA SNPDISHREA FSTAAKNWAH FPHIHFGLKL DGNKQAKLDQ QGDGTQKSNG 180 FY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	3e-72	YABBY family protein