PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341045.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 512aa MW: 56396.5 Da PI: 6.324

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.9	2.4e-18	42	89	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l+d+v+++G g+W+++ r g++R++k+c++rw ++l XP_027341045.1 42 KGPWTTTEDAILIDYVTKHGEGNWNAVQRNTGLNRCGKSCRLRWANHL 89 79******************************************9986 PP
2	Myb_DNA-binding	52.7	9.8e-17	95	138	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE++l+v++++q+G++ W++ a+ ++ gRt++++k++w++ XP_027341045.1 95 KGAFSPEEEKLIVELHAQFGNK-WARMAALLP-GRTDNEIKNYWNT 138 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MERINEAANC ENGLLAMAGG NERGGGVGGE GGGNVEEVTL KKGPWTTTED AILIDYVTKH 60 GEGNWNAVQR NTGLNRCGKS CRLRWANHLR PNLKKGAFSP EEEKLIVELH AQFGNKWARM 120 AALLPGRTDN EIKNYWNTRI KRRQRQGLPL YSDDHDHHSP STPTNTSSPC VTPTGSNPNT 180 APKFEFLNQH QHHPLSPTAP HHYSPLTSPL QHRPPSNYNS PHTFLDPSPL PLSSSSPSPL 240 SFTFQRPAPV LCTPLRFKRY RSTPSYNLQA PSITPFSSSL SDPTLTTHLT DPEGFRFPSS 300 SFSQFFQPNL LDSDRGVSSS SSSSSIFPTK FELPSNHFSK PLLQEQDIKL DIEFNDPAFQ 360 TSSGLLEDLL LEAQALASGQ NIKKRSYLSL NEGNDVFDGC QSFEDLPLSS VYWSSSTPGS 420 KPKEEAPDLS KFMNEDLSSL LTVLPSSNAP VQDWHNNNAP EASNVHSSGS VMTDDNFGLD 480 IKPIASLFPL TNTTNHNENP GCYTWDNLPG LC

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MERINEAANC ENGLLAMAGG NERGGGVGGE GGGNVEEVTL KKGPWTTTED AILIDYVTKH  60
GEGNWNAVQR NTGLNRCGKS CRLRWANHLR PNLKKGAFSP EEEKLIVELH AQFGNKWARM  120
AALLPGRTDN EIKNYWNTRI KRRQRQGLPL YSDDHDHHSP STPTNTSSPC VTPTGSNPNT  180
APKFEFLNQH QHHPLSPTAP HHYSPLTSPL QHRPPSNYNS PHTFLDPSPL PLSSSSPSPL  240
SFTFQRPAPV LCTPLRFKRY RSTPSYNLQA PSITPFSSSL SDPTLTTHLT DPEGFRFPSS  300
SFSQFFQPNL LDSDRGVSSS SSSSSIFPTK FELPSNHFSK PLLQEQDIKL DIEFNDPAFQ  360
TSSGLLEDLL LEAQALASGQ NIKKRSYLSL NEGNDVFDGC QSFEDLPLSS VYWSSSTPGS  420
KPKEEAPDLS KFMNEDLSSL LTVLPSSNAP VQDWHNNNAP EASNVHSSGS VMTDDNFGLD  480
IKPIASLFPL TNTTNHNENP GCYTWDNLPG LC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	1e-65	MYB family protein