PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340877.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 535aa    MW: 58887.5 Da    PI: 5.4438
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS453.61.2e-1381665261374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+ +++cAeav++++l+ a+al++++  la ++  +m+++a+yf+eALa+r++r    +y     ++  +++ +++l++   f+e++P+lkf+h
  XP_027340877.1 166 LVHSITACAEAVEKNNLAVAEALVKQIGFLAVSQVGAMRKVATYFAEALARRIYR----VYP----ENPLQHSFADNLQI--HFYETCPYLKFAH 250
                     68999**************************************************....552....22222224444443..4************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea++g++rvH+iDf+i+qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p++++++ l+e+g++La++Ae+++v+fe++ +va++l+dl+
  XP_027340877.1 251 FTANQAILEAFQGKNRVHVIDFGINQGMQWPALMQALAVRPGGPPAFRLTGIGPPAADNSDHLQEVGRKLAQLAEAIHVQFEYRSFVANSLADLD 345
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                      ++L+v+p   E++aVn+v++ h+ll++++++e+    vL++v++++P++++v+eqea+hn++ Fl+rf+e+l+yys+lfdsle +  + s +++
  XP_027340877.1 346 ASMLEVRPsdAESVAVNSVFEFHKLLARPGAVEK----VLSMVRQIRPEILTVAEQEANHNGPGFLDRFTESLHYYSTLFDSLEGS--SVSTQDK 434
                     ********999***********************....*********************************************888..57999** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++++++lg++i+nvvaceg er+erhetl++Wr r+++aGF+pv+l+++a kqa++ll+ ++ ++gyrvee++g+l+lgW++rpL+++SaW+
  XP_027340877.1 435 VMSEMYLGKQICNVVACEGLERVERHETLNQWRTRFSSAGFSPVHLGSNAFKQASTLLALFAgGEGYRVEENNGCLMLGWHTRPLIATSAWQ 526
                     *******************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    
MKREHEHLCS NASTATSSCG VWEEEEVMDE LLAMVGYKVR SSDMAEVAQK IEQLEEAIGS  60
VQDGITHLSS ETVHYNPSDI SNWVETMLCT IDPLPPSSVL IDQPNRPFED SSSSDYDLKV  120
IPGKAIYASS STASTDSPAP NPKRLKTTES TRAVVVVDSQ ENGIRLVHSI TACAEAVEKN  180
NLAVAEALVK QIGFLAVSQV GAMRKVATYF AEALARRIYR VYPENPLQHS FADNLQIHFY  240
ETCPYLKFAH FTANQAILEA FQGKNRVHVI DFGINQGMQW PALMQALAVR PGGPPAFRLT  300
GIGPPAADNS DHLQEVGRKL AQLAEAIHVQ FEYRSFVANS LADLDASMLE VRPSDAESVA  360
VNSVFEFHKL LARPGAVEKV LSMVRQIRPE ILTVAEQEAN HNGPGFLDRF TESLHYYSTL  420
FDSLEGSSVS TQDKVMSEMY LGKQICNVVA CEGLERVERH ETLNQWRTRF SSAGFSPVHL  480
GSNAFKQAST LLALFAGGEG YRVEENNGCL MLGWHTRPLI ATSAWQLASK SVVAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein