PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340713.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 448aa MW: 49997.6 Da PI: 7.3401

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.2	3e-40	174	250	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC +dls+ak+yhr+h+vCe hsk+++v+v+gle+rfCqqCsrfh l efDe+krsCrrrL +hn+rrrk+ XP_027340713.1 174 CCQVEGCGVDLSSAKDYHRKHRVCESHSKSAKVIVAGLERRFCQQCSRFHGLLEFDEKKRSCRRRLLDHNARRRKPL 250 6**************************************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MEWNAKSSPQ WDWEHVFLNT KPAGENLKLQ SPNWSGEANR EINVELFDTS GGSGCSGSEL 60 IHASSSRTSK SASINSSSNM GSKTSIFTFE NSQDDSSAKK ELSKEEPVET SHPLEPSSVS 120 GEPLLTLKLG KRLYFEDVCP GSDAKNLSFS KDPISSLSIG KKCKSNGQNV QYPCCQVEGC 180 GVDLSSAKDY HRKHRVCESH SKSAKVIVAG LERRFCQQCS RFHGLLEFDE KKRSCRRRLL 240 DHNARRRKPL PEAVQLSKSA LSSAPCEVRQ QMSPFAYSRT AANLACQDIH SSKLPLTKDF 300 LMKPAKTNPE MPRIVTMLSN ESDICFTSKG LASKSIDRGV EDSINSSDPN ATQDFHRALS 360 LLSTNSWGSY ESKSISLEHS SHTITTTQPM THAVNQRLPL ASSDYWHTDQ PLNSSMWIYS 420 NSDDNNRFHE FQLFREPYES GFPYDQLD

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MEWNAKSSPQ WDWEHVFLNT KPAGENLKLQ SPNWSGEANR EINVELFDTS GGSGCSGSEL  60
IHASSSRTSK SASINSSSNM GSKTSIFTFE NSQDDSSAKK ELSKEEPVET SHPLEPSSVS  120
GEPLLTLKLG KRLYFEDVCP GSDAKNLSFS KDPISSLSIG KKCKSNGQNV QYPCCQVEGC  180
GVDLSSAKDY HRKHRVCESH SKSAKVIVAG LERRFCQQCS RFHGLLEFDE KKRSCRRRLL  240
DHNARRRKPL PEAVQLSKSA LSSAPCEVRQ QMSPFAYSRT AANLACQDIH SSKLPLTKDF  300
LMKPAKTNPE MPRIVTMLSN ESDICFTSKG LASKSIDRGV EDSINSSDPN ATQDFHRALS  360
LLSTNSWGSY ESKSISLEHS SHTITTTQPM THAVNQRLPL ASSDYWHTDQ PLNSSMWIYS  420
NSDDNNRFHE FQLFREPYES GFPYDQLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	231	248	KKRSCRRRLLDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	7e-46	SBP family protein