PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027340183.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 309aa MW: 34357.5 Da PI: 8.0096 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.1 | 1.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l++++k +G g+W++ +++ g+ R++k+c++rw +yl XP_027340183.1 14 KGAWSKEEDQRLINYIKVHGEGCWRSLPKEAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 57.6 | 2.9e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE ++++++++++G++ W++Ia++++ gRt++++k++w+++l XP_027340183.1 67 RGNFTEEENDQIIRLHRLHGNK-WSLIAAKLP-GRTDNEIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MGRSPCCDKE HTIKGAWSKE EDQRLINYIK VHGEGCWRSL PKEAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEENDQIIR LHRLHGNKWS LIAAKLPGRT DNEIKNYWNT HLKRLLHVRG 120 IDPTTHKSLK DTATSSKAAA TTTSPTPNTP VPVVNTTSQK NTKNSSINSS SSSNNIKNNY 180 SFHYFNVYLN SKVQIITNSA GEDSNSSSGV TTEEPYPQLS LELSLAPPSD QPQVSDSMNS 240 DMLKPQEQQE QQGSQCMCQC YNLGLQSDQA CGCKAMGSGA AITVISTVTD NNLCDYECTD 300 FMGAKNMNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 1e-76 | MYB family protein |