PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339666.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 594aa    MW: 67684.9 Da    PI: 5.8421
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS304.82e-932205922374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselyk.al.ppsetseknsseelaalkl.fsevsPilkf 93 
                      e Ll+ Ae v  +++e+a++lL++ + las++g+p++R+++yf+eAL++r+ r++ ++++  l + +  ++++ ++el+ + + f+e  P+ ++
  XP_027339666.1 220 AESLLASAEKVGYQQFERASKLLSHCESLASKTGNPVKRVVHYFAEALRQRIDRETGRVSSkDLqKLELFDPEKAAKELNPTIVaFYEDLPFCQI 314
                     57899*************************************************6666654145344555566666666655557********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     + +t  qaI + v+ ++++H+iD++i +G+QW  L++aL sR e p   l+iT+v+s  ++sk+ +e tg+rL++fA+ l++pf fnv+++ ++ 
  XP_027339666.1 315 AVFTSIQAIIDNVADAKKIHVIDLEIRKGGQWTILMKALESRHECPIeLLKITAVES-GTTSKHIVEDTGKRLKDFAQCLNIPFYFNVVMVPDML 408
                     *******************************************7665499*******.6679**************************9999*** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                      l+ e+++++p+E++aV ++ +l    ++s +le     +++++++++P+v+vv+e ea+hns+sF++rf+eal ++sa+fd+le+ +  ++++r
  XP_027339666.1 409 HLKEEQFDIDPEETIAVYSQCALRINIQHSKQLET----LMRVIRTINPNVMVVIEIEANHNSTSFVNRFIEALFFFSAFFDCLETCMKGDEKNR 499
                     **********************9999988888777....******************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +E ++++  i+n+va eg+er+ r+ ++  Wr+ +++ G+ + +ls+    qa+l+ ++++  +  +++ +  +l++gWk+ p+ svS+W+
  XP_027339666.1 500 MIMESMYFNHGIRNIVAEEGEERKTRNVKVDVWRAFFSRYGMVETELSSLSLYQADLVAKRFPcARFCTLNMNGRCLLIGWKGTPISSVSVWK 592
                     ***************************************************************98989999*********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MEDSYHFSEF SFNAIEDNSS SSNDIFWATE GLNEVKMVKF SGAEHWGESR GIDSLCSNFG  60
FFPDGPSEEG YLLSTNEQNY HLQPSYHDYS QFDNLHFDMV SSPLQFHKQY QPMASLCHPK  120
KEKPHSTTSL ASLEILKNYG KGFRRLCNEG KKTLQPVDGL VAVTNEKKLS TEDVMKVAGT  180
RFIQSSSSES QEGFKFLDTH PFGFSFSGLS DEEKEDVALA ESLLASAEKV GYQQFERASK  240
LLSHCESLAS KTGNPVKRVV HYFAEALRQR IDRETGRVSS KDLQKLELFD PEKAAKELNP  300
TIVAFYEDLP FCQIAVFTSI QAIIDNVADA KKIHVIDLEI RKGGQWTILM KALESRHECP  360
IELLKITAVE SGTTSKHIVE DTGKRLKDFA QCLNIPFYFN VVMVPDMLHL KEEQFDIDPE  420
ETIAVYSQCA LRINIQHSKQ LETLMRVIRT INPNVMVVIE IEANHNSTSF VNRFIEALFF  480
FSAFFDCLET CMKGDEKNRM IMESMYFNHG IRNIVAEEGE ERKTRNVKVD VWRAFFSRYG  540
MVETELSSLS LYQADLVAKR FPCARFCTLN MNGRCLLIGW KGTPISSVSV WKFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-47GRAS family protein