PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339642.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family bHLH
Protein Properties Length: 343aa    MW: 38399 Da    PI: 7.9334
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-09165212455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_027339642.1 165 SHSLAERVRREKISERMKVLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 212
                     8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MAAFSYQYHP FLVDPSFLPT ASPPITATQF PLHQETSFNV TNQDTSCVDQ SSKVSVSDNE  60
PSVTKNNLSP QSSMGVDKLE TGEQVTQKVT PMDKKRRTRT GSSLSNPQSK DTAVEGKNKK  120
PRKSNGEVKE EEKRKGEKKD QRKCPEEPPT GYIHVRARRG QATDSHSLAE RVRREKISER  180
MKVLQRLVPG CDKVTGKALM LDEIINYVQS LQNQVEFLSM KLASVNPMFY DMTTDLDVLL  240
VRPEKLNSIA SPSPSPSPLP SVSHCNSPNQ GTTFADTTTM TPTNIFHTVA SDYLLDNSAS  300
FFLQGQRSNV FSEDTGSHFW DVEDQRQKFL HPYGFSNNLC SFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-57bHLH family protein