PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338982.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 301aa MW: 33879.6 Da PI: 5.2256

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	81.3	9.9e-26	137	197	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dD y+WrKYGqKe+ +s+fprsY+rCt + gC+++k+v+r++e+p++ +itY g H+++ XP_027338982.1 137 DDNYAWRKYGQKEILNSQFPRSYFRCTRKydqGCQATKQVQRTQENPDMYHITYIGFHTCK 197 8************************998899************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MSIFFPQSAS AKRKRVIREL VQGQKDATQL KFLLQQLIGP DGSVSAMELA TNVLRSFDET 60 LSVLTSSEVS AGSADDEVAQ NLVDSGEAEV AASSIDPMSE DSSESRKRSL PVAKDRRGSY 120 KRRKTEQTRT IVSQTTDDNY AWRKYGQKEI LNSQFPRSYF RCTRKYDQGC QATKQVQRTQ 180 ENPDMYHITY IGFHTCKDTL KGPQMVAYSD TWDSFLVNSH PDSNVPNEED SPIISKSPNI 240 KRENPNDDTL SDLTDANLWS DLKDIEISNP SVHLIMQTGS QCLHMDFGFS TDFHFDGGHL 300 L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	124	RKRSLPVAKDRRGSYKRRK
2	121	148	KRRKTEQTRTIVSQTTDDNYAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	7e-49	WRKY family protein